I think he has missed a trick to set an example and use zero emissions (in this case hydrogen) for the booster stage. Yes he said they did a trade off but what was presented was overly simplistic and looked at the choice of propellants for all stages of the mission. Nothing wrong with using different ones for each stage.
Yes we want methane for Mars because it's easy to make there and actually warming the place up is no bad thing, but can you imagine 50,000+ flights of that 10000 tonne booster spewing CO2 everywhere? Perhaps that's really why Tesla exists, to sell credits to use to offset SpaceX...