So, I still don't know what you are saying. When you unlock the door with the key fob or approach the car with the keys in your pocket, the front passenger door does not open, but all other doors will. When you touch the door handle of the passenger door, it doesn't present at all and the door won't open. When you unlock the car or walk up to it with the keys on you, all door handles present themselves except the front passenger. The car is set to unlock all doors when the unlock door is pressed.
On the front passenger window, when you open the door from the inside, does the window drop down 1 inch to allow the door to open, or does it stay up in the channel making it very difficult to open the door? When you close the door, does the window go back up in the channel, remain open a bit, or door doesn't close well because window is still all the way up?