Just got the Model 3 back from service. They couldn't provide any more details on what specifically went wrong, but I did notice that they had to downgrade the firmware from where it was previously.
36.2.4 -> 32.12.6
So with that older firmware, I didn't have cone visualization. I did have 40.2.1 available to be installed, but didn't have time to install that. I couldn't really tell any difference in AP performance.
Also, it seems that the car was "partially" reset. User profiles were reset, HomeLink reset, music was still there (didn't check music levels), and I'm guessing most other settings went back to defaults.
Parts:
NUT,HF,M8x1.25,[10] G1409,LOCK(2007104-00-B) 4.0
ASY,HARN,HW3,RETROFIT,M3(1518762-00-A) 1.0
TLA,CAR.COMP,NA,HW3.0,M3 - PROV-Retrofit(1462554-R0-H) 1.0