I haven't supercharged yet, but I hear that sound everytime i get into the car, it greets me with that sound when the system is waking up.
also when I tap on the floor on the rear seats floorpan it makes the same sound.
I have exactly this (what you describe). I have super charged as the car was ready faster than I could get an electrician out to install my wall connector, so I supercharged while waiting for that to happen. The sound DIDNT happen for me when super charging. Instead, it happens every time I get into the car, when the car is waking up.
I decided to make a service appointment for it, and also because my screen boots up as if I hard rebooted it almost every time I get into the car.
When I called service on the noise issue, they called the service center while they put me on hold, and came back and told me "the service center cancelled your appointment for tomorrow and I need to reschedule it because they had to order parts for your issue".
I said " did they say what the issue is?" and the phone rep said "no".. then I said "but they have some idea of what it is though, since they are ordering parts...." and the phone rep said "I guess so....".
My new appointment is on 12/27 so I will let people know what happens. Not sure if they are going to address the noise issue or my screen, or both but we will see.