I have a 2005 Prius and have never had a problem with the 12 volt battery. Nor have my friends have problems with the 12 volt battery in their Pri's. I did just replace the battery, but not because it was bad. I gave the car to my 17 year old son, and figured after 7 years, it would not hurt to replace it.
I've never had a problem on either of my Prius, but it's one of the most frequent topics in the Prius groups.